Books  Animal & General Biology  Genetics 

Association Mapping in Plants

Edited By: NC Oraguzie, EHA Rikkerink, SE Gardiner and HN de Silva

277 pages, Figs, tabs, col plates

Springer-Verlag

Hardback | Jan 2007 | #162984 | ISBN-13: 9780387358444
Availability: Usually dispatched within 1-2 weeks Details
NHBS Price: £141.50 $178/€166 approx

About this book

For the past decade, there has been success in using conventional map-based strategies in identification and cloning of quantitative trait loci (QTL) in model plant species including tomato and Arabidopsis. These quantitative traits are generally the products of many loci with varying degrees of effect upon the observed phenotypes. Recently, a new approach to genetic mapping has emerged called association mapping. This new technique takes into account the thousands of genes to evaluate for QTL effect and is a more efficient approach that does not require generation of segregating populations/large numbers of progeny. As it can utilize all of the historic recombination events in a diverse population of individuals it can generate higher resolution genetic maps and, is needed to complement current map based cloning methods.

Association Mapping in Plants provides both basic and advanced understanding of association mapping and an awareness of population genomics tools to facilitate mapping and identification of the underlying causes of quantitative trait variation in plants. It acts as a useful review of the marker technology, the statistical methodology, and the progress to date. It also offers guides to the use of single nucleotide polymorphisms (SNPs) in association studies.

From the reviews: "Association mapping in plants is a timely, well-planned book that covers most topics related to association mapping in plants ! as well as giving insights into the potential impact of association mapping in plant breeding programmes. ! can be used both as an introductory book for students and as a manual to design experiments and analyse genetic association date by experienced researchers or breeding program managers. ! In conclusion, we recommend Association mapping in plants as an excellent book to researchers and professionals ! ." (Santiago C. Gonzalez-Martinez and Delphine Grivet, Annals of Botany, Vol. 104 (6), November, 2009)


Contents

Introduction.- An Overview of Association Mapping.- Linkage Disequilibrium.- What Are SNPs?- Single Nucleotide Polymorphism Discovery.- Single Nucleotide Polymorphism Genotyping in Plants.- SNP Applications in Plants.- Linkage Disequilibrium Mapping Concepts.- Statistical Analysis and Experimental Design.- Linkage Disequilibrium-Based Association Mapping in Forage Species.- Gene-Assisted Selection: Applications of Association Genetics for Forest Tree Breeding.- Prospects of Association Mapping in Perennial Horticultural Crops.- Keyword Index.

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Biography

Dr. Nnadozie C. Oraguzie is a Senior Scientist in Genetics at the Horticulture and Food Research Institute of New Zealand Ltd (HortResearch). Dr. Erik H. A. Rikkerink is a Science Leader at HortResearch, New Zealand. Dr. Susan E. Gardiner is a Principal Scientist and leader of the Gene Mapping research team at HortResearch, New Zealand. Dr. H. Nihal De Silva is a Senior Scientist of Biometrics at HortResearch, New Zealand.

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