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About this book
Details protocols for using a number of popular, commercially available, sequence packages.
Contents
GeneJockeyII: Entering and Editing Sequences Phil Taylor. The Genetic Data Environment: A User Modifiable and Expandable Multiple Sequence Analysis Package Jonathan A. Eisen. ABI Analysis: Manipulation of Sequence Data from the ABI DNA Sequencer Tracy L. Hagemann and Sau-Ping Kwan. SeqEd: Manipulation of Sequence Data and Chromatograms from the ABI DNA Sequencer Analysis Files Tracy L. Hagemann and Sau- Ping Kwan. From ABI Sequence Data to LASERGENE'S EDITSEQ Catherine Arnold and Jonathan P. Clewley. Seqman: Contig Assembly Simon R. Swindell. GeneJockeyII: DNA Sequencing and Fragment Assembly Phil Taylor. AutoAssembler Steven R. Parker. MEGALIGN: The Multiple Alignment Module of LASERGENE Jonathan P. Clewley and Catherine Arnold. GeneJockeyII: Pairwise Sequence Comparison Phil Taylor. GeneJockeyII: Multiple Alignment of Homologous Sequences Phil Taylor. Sequence Navigator: Multiple Sequence Alignment Software Steven R. Parker. The European Bioinformatics Institute: Network Services Tomas P. Flores and Robert A. Harper. InheritTM Gene Assist: Smith-Waterman and Other Database Similarity Searches and Identification of Motifs Eugene G. Shpaer. GENEMAN of LASERGENE Jonathan P. Clewley. GeneJockeyII: Database Searching Phil Taylor. GeneJockeyII: Restriction Analysis Phil Taylor. GeneJockeyII: Translation and Open Reading Frame Analysis Phil Taylor. PROTEAN: Protein Sequence Analysis and Prediction Thomas N. Plasterer. MAPDRAW: Restriction Mapping and Analysis Thomas N. Plasterer. The Gene Construction Kit: DNA Sequence Analysis and Presentation Bruce R. Troen. GeneJockeyII: Primer Design Phil Taylor. OLIGO: Primer Selection Juan Jose Estruch. PRIME: Primer Selection Juan Jose Estruch. PRIMERSELECT: Primer and Probe Design Thomas N. Plasterer. The European Bioinformatics Institute: Submission and Updating of Sequence Databases Tomas P. Flores and Benny Shomer. Index.
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