As membrane trafficking research has expanded over the past thirty years, a remarkable convergence of information has been gained by using genetic approaches in yeast cells with biochemical approaches in mammalian cells.
Membrane Trafficking reflects these advances by devoting one section of the book to yeast cells and the other to mammalian cells, with each section providing both classic and cutting-edge techniques to study macromolecular transport across the membranes. These protocols, contributed by top experts in the field, have been tested in laboratories all around world. As a volume of the highly successful Methods in Molecular Biology??? series, the chapters include step-by-step laboratory protocols, a list of necessary materials and reagents, and the greatly beneficial Notes section, which aids in troubleshooting and avoiding known pitfalls.
Comprehensive and state-of-the-art, Membrane Trafficking is the ideal reference for both senior researchers experienced in the field and graduate students studying membrane trafficking for the first time.
Table of Contents Part I. Yeast Cells Ch. 1) Freight Management in the Cell: Current Aspects of Intracellular Membrane Trafficking Johannes M. Herrmann and Anne Spang Ch. 2) High-throughput Protein Extraction and Immunoblotting Analysis in Saccharomyces cerevisiae Todd C. Lorenz, Vikram C. Anand, and Gregory S. Payne Ch. 3) Genome-wide Analysis of Membrane Transport Using Yeast Knockout Arrays Helen E. Burston, Michael Davey, and Elizabeth Conibear Ch. 4) A Cell-free System for Reconstitution of Transport between Prevacuolar Compartments and Vacuoles in Saccharomyces cerevisiae Thomas A. Vida Ch. 5) In vitro Analysis of the Mitochondrial Preprotein Import Machinery Using Recombinant Precursor Polypeptides Dorothea Becker, Martin Krayl, and Wolfgang Voos Ch. 6) In vitro Import of Proteins into Isolated Mitochondria Karl Bihlmaier, Melanie Bien, and Johannes M. Herrmann Ch. 7) Synthesis and Sorting of Mitochondrial Translation Products Heike Bauerschmitt, Soledad Funes, and Johannes M. Herrmann Ch. 8) In Vivo Labeling and Analysis of Mitochondrial Translation Products in Budding and in Fission Yeasts Karine Gouget, Fulvia Verde, and Antoni Barrientos Ch. 9) Exploring Protein-protein Interactions Involving Newly Synthesized Mitochondrial DNA Encoded Proteins Darryl Horn, Flavia Fontanesi, and Antoni Barrientos Ch. 10) Purification of Yeast Membranes and Organelles by Sucrose Density Gradient Centrifugation Jennifer Chang, Victoria Ruiz, and Ales Vancura Ch. 11) Microscopic Analysis of Lipid Droplet Metabolism and Dynamics in Yeast Heimo Wolinski and Sepp D. Kohlwein Ch. 12) Use of Bimolecular Fluorescence Complementation (BiFC) in Yeast Saccharomyces cerevisiae Kari-Pekka Skarp, Xueqiang Zhao, Marion Weber, and Jussi Jantti Part II. Mammalian Cells Ch. 13) Using Quantitative Fluorescence Microscopy to Probe Organelle Assembly and Membrane Trafficking Brian Storrie, Tregei Starr, and Kimberly Forsten-Williams Ch. 14) Measuring Secretory Membrane Traffic: a Quantitative Fluorescence Microscopy Approach Vytaute Starkuviene, Arne Seitz, Holger Erfle and Rainer Pepperkok Ch. 15) A Correlative Light and Electron Microscopy Method Based on Laser Micropatterning and Etching Julien Colombelli, Carolina Tangemo, Uta Haselman, Claude Antony, Ernst H.K. Stelzer, Rainer Pepperkok, and Emmanuel G. Reynaud Ch. 16) Approaches to Investigate the Role of Signaling in ER-to-Golgi Transport Laura J. Sharpe, Ximing Du, and Andrew J. Brown Ch. 17) Recruitment of Coat Proteins to Peptidoliposomes Gregor Suri, Martin Spiess, and Pascal Crottet Ch. 18) SNAREs Mediated Fusion of Liposomes Jerome Vicogne and Jeffrey E. Pessin Ch. 19) Use of Polarized PC12 Cells to Monitor Protein Localization in the Early Biosynthetic Pathway Ragna Sannerud, Michael Marie, Bodil Berger Hansen and Jaakko Saraste Ch. 20) Tracking the Transport of E-Cadherin to and from the Plasma Membrane Matthew P. Wagoner, Kun Ling, and Richard A. Anderson Ch. 21) Analysis of Nucleocytoplasmic Shuttling of NFkB Proteins in Human Leukocytes Chandra C. Ghosh, Hai-Yen Vu, Tomas Mujo, and Ivana Vancurova Ch. 22) Imaging pHluorin-based Probes at Hippocampal Synapses Stephen J. Royle, Bjorn Granseth, Benjamin Odermatt, Aude Derevier, and Leon Lagnado Ch. 23) Analysis of Receptor Tyrosine Kinase Internalization Using Flow Cytometry Ning Li, Kristen S. Hill, and Lisa A. Elferink Ch. 24) Measurement of Receptor Endocytosis and Recycling Jane M. Knisely, Jiyeon Lee, and Guojun Bu Ch. 25) Styryl Dye-Based Synaptic Vesicle Recycling Assay in Cultured Cerebellar Granule Neurons Victor Anggono, Michael A. Cousin, and Phillip J. Robinson Ch. 26) Use of Quantitative Immunofluorescence Microscopy to Study Intracellular Trafficking: Studies of the GLUT4 Glucose Transporter Vincent Blot and Timothy E. McGraw Ch. 27) Dissecting GLUT4 Traffic Components in L6 Myocytes by Fluorescence-based, Single Cell Assays Costin N. Antonescu, Varinder K Randhawa, and Amira Klip Ch. 28) Functional Genetic Analysis of the Mammalian Mitochondrial DNA Encoded Peptides: a Mutagenesis Approach Maria Pilar Bayona-Bafaluy, Nieves Movilla, Acisclo Perez-Martos, Patricio Fernandez-Silva and Jose Antonio Enriquez
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